Holmium in PDB 4bsp: Crystal Structure of R-Spondin 1 (FU1FU2) - Holmium Soak

The structure of Crystal Structure of R-Spondin 1 (FU1FU2) - Holmium Soak, PDB code: 4bsp was solved by W.C.Peng, W.De Lau, F.Forneris, J.C.M.Granneman, M.Huch, H.Clevers, P.Gros, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	52.916 / 2.00
Space group	I 2 2 2
Cell size a, b, c (Å), α, β, γ (°)	35.630, 64.560, 92.370, 90.00, 90.00, 90.00
R / Rfree (%)	22.81 / 26.03

The binding sites of Holmium atom in the Crystal Structure of R-Spondin 1 (FU1FU2) - Holmium Soak (pdb code 4bsp). This binding sites where shown within 5.0 Angstroms radius around Holmium atom.
In total 2 binding sites of Holmium where determined in the Crystal Structure of R-Spondin 1 (FU1FU2) - Holmium Soak, PDB code: 4bsp:
Jump to Holmium binding site number: 1; 2;

Holmium binding site 1 out of 2 in the Crystal Structure of R-Spondin 1 (FU1FU2) - Holmium Soak


Mono view


Stereo pair view

A full contact list of Holmium with other atoms in the Ho binding site number 1 of Crystal Structure of R-Spondin 1 (FU1FU2) - Holmium Soak within 5.0Å range: probe atom residue distance (Å) B Occ A:Ho200 b:47.8 occ:0.52 OE1 A:GLU103 2.7 36.4 1.0 OE2 A:GLU103 2.7 37.9 1.0 OE2 A:GLU116 2.7 48.4 1.0 OE1 A:GLU116 2.8 46.4 1.0 O A:HOH2014 3.0 50.3 1.0 CD A:GLU103 3.1 32.7 1.0 CD A:GLU116 3.1 50.6 1.0 H A:GLU116 4.2 42.6 1.0 HA A:LYS115 4.3 43.8 1.0 HE2 A:LYS113 4.4 43.4 1.0 CG A:GLU103 4.6 33.9 1.0 CG A:GLU116 4.6 48.5 1.0 N A:GLU116 4.9 35.5 1.0 HG2 A:GLU103 4.9 40.7 1.0 HG3 A:GLU116 4.9 58.2 1.0 HG3 A:GLU103 5.0 40.7 1.0

Holmium binding site 2 out of 2 in the Crystal Structure of R-Spondin 1 (FU1FU2) - Holmium Soak


Mono view


Stereo pair view

A full contact list of Holmium with other atoms in the Ho binding site number 2 of Crystal Structure of R-Spondin 1 (FU1FU2) - Holmium Soak within 5.0Å range: probe atom residue distance (Å) B Occ A:Ho201 b:43.3 occ:0.19 OE2 A:GLU100 2.7 84.4 1.0 OE1 A:GLU100 2.7 66.0 1.0 CD A:GLU100 3.1 71.8 1.0 CG A:GLU100 4.6 61.2 1.0 HE1 A:HIS101 4.8 65.7 1.0 HG2 A:GLU100 5.0 73.4 1.0

W.C.Peng, W.De Lau, F.Forneris, J.C.M.Granneman, M.Huch, H.Clevers, P.Gros. Structure of Stem Cell Growth Factor R-Spondin 1 in Complex with the Ectodomain of Its Receptor LGR5. Cell Rep. V. 3 1885 2013.
ISSN: ISSN 2211-1247
PubMed: 23809763
DOI: 10.1016/J.CELREP.2013.06.009